Kevin Naidoo University of Cape Town
1 protocol

Christopher Barnett University of Cape Town
1 protocol

Tharindu Senapathi
Research focus
  • Molecular biology
  • 1 Author merit


M.Sc., University of Cape Town, South Africa, 2016

Current position

PhD Student, Scientific Computing Research Unit and Department of Chemistry, University of Cape Town, Not US or Canada, 2017-0


  1. Miroslav Suruzhon, Tharindu Senapathi, Michael Steven Bodnarchuk, Russell Viner, Ian Wall, Christopher B. Barnett, Kevin J. Naidoo, Jonathan W. Essex: ProtoCaller: Robust Automation of Binding Free Energy Calculations. Journal of Chemical Information and Modeling 02/2020; DOI:10.1021/acs.jcim.9b01158. Tharindu Senapathi, Simon Bray, Christopher B. Barnett, Björn Grüning, Kevin J Naidoo: Biomolecular Reaction and Interaction Dynamics Global Environment (BRIDGE). Bioinformatics 02/2019; 35(18)., DOI:10.1093/bioinformatics/btz107. Upendra A. Rathnayake, Tharindu Senapathi, Chanaka Sandaruwan, Sanja Gunawardene, Veranja Karunaratne, Nilwala Kottegoda: Rice bran nanofiber composites for stabilization of phytase. Chemistry Central Journal 03/2018; 12(1)., DOI:10.1186/s13065-018-0400-y.
1 Protocol published
BRIDGE: An Open Platform for Reproducible Protein-Ligand Simulations and Free Energy of Binding Calculations
Authors:  Tharindu Senapathi, Christopher B. Barnett and Kevin J. Naidoo, date: 09/05/2020, view: 6827, Q&A: 3
Protein-ligand binding prediction is central to the drug-discovery process. This often follows an analysis of genomics data for protein targets and then protein structure discovery. However, the complexity of performing reproducible protein ...
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