Hirokazu Tsukaya Biological Science The University of Tokyo
2 protocols

Kensuke Kawade Okazaki Institute for Integrative Bioscience, Japan
1 protocol

Hokuto Nakayama Department of Plant Biology, University of California Davis, USA
1 protocol

Seisuke Kimura
  • Department of Bioresource and Environmental Sciences, Kyoto Sangyo University, Japan
Research focus
  • Plant science
  • 1 Author merit


Ph.D., Department of Applied Biological Science, Tokyo University of Science, Japan, 2001

Current position

Associate Professor, Department of Bioresource and Environmental Sciences, Kyoto Sangyo University, Kyoto, Japan

Publication (since 2008)

  1. Aguilar-Martinez, J. A., Uchida, N., Townsley, B., West, D. A., Yanez, A., Lynn, N., Kimura, S. and Sinha, N. (2015). Transcriptional, posttranscriptional, and posttranslational regulation of SHOOT MERISTEMLESS gene expression in Arabidopsis determines gene function in the shoot apex. Plant Physiol 167(2): 424-442.
  2. Nakayama, H., Nakayama, N., Seiki, S., Kojima, M., Sakakibara, H., Sinha, N. and Kimura, S. (2014). Regulation of the KNOX-GA gene module induces heterophyllic alteration in North American lake cress. Plant Cell 26(12): 4733-4748.
  3. Nakamasu, A., Nakayama, H., Nakayama, N., Suematsu, N. J. and Kimura, S. (2014). A developmental model for branching morphogenesis of lake cress compound leaf. PLoS One 9(11): e111615.
  4. Bolger, A., Scossa, F., Bolger, M. E., Lanz, C., Maumus, F., Tohge, T., Quesneville, H., Alseekh, S., Sorensen, I., Lichtenstein, G., Fich, E. A., Conte, M., Keller, H., Schneeberger, K., Schwacke, R., Ofner, I., Vrebalov, J., Xu, Y., Osorio, S., Aflitos, S. A., Schijlen, E., Jimenez-Gomez, J. M., Ryngajllo, M., Kimura, S., Kumar, R., Koenig, D., Headland, L. R., Maloof, J. N., Sinha, N., van Ham, R. C., Lankhorst, R. K., Mao, L., Vogel, A., Arsova, B., Panstruga, R., Fei, Z., Rose, J. K., Zamir, D., Carrari, F., Giovannoni, J. J., Weigel, D., Usadel, B. and Fernie, A. R. (2014). The genome of the stress-tolerant wild tomato species Solanum pennellii. Nat Genet 46(9): 1034-1038.
  5. Yoshiyama, K. O., Kimura, S., Maki, H., Britt, A. B. and Umeda, M. (2014). The role of SOG1, a plant-specific transcriptional regulator, in the DNA damage response. Plant Signal Behav 9(4): e28889.
  6. Nakayama, H., Fukushima, K., Fukuda, T., Yokoyama, J. and Kimura, S. (2014). Molecular phylogeny determined using chloroplast DNA inferred a new phylogenetic relationship of Rorippa aquatica (Eaton) EJ Palmer & Steyermark (Brassicaceae)-Lake. Cress American Journal of Plant Sciences 5: 48-54.
  7. oshiyama, K. O., Sakaguchi, K. and Kimura, S. (2013). DNA damage response in plants: conserved and variable response compared to animals. Biology (Basel) 2(4): 1338-1356.
  8. Yoshiyama, K. O., Kobayashi, J., Ogita, N., Ueda, M., Kimura, S., Maki, H. and Umeda, M. (2013). ATM-mediated phosphorylation of SOG1 is essential for the DNA damage response in Arabidopsis. EMBO Rep 14(9): 817-822.
  9. Koenig, D.*, Jiménez-Goméz, J. M.*, Kimura, S. §, Fulop, D. §, Chitwood, D. H., Headland, L. R., Kumar, R., Covington, M. F., Devisetty, U. K., Tat, A. V., Tohge, T., Bolger, A., Schneeberger, K., Ossowski, S., Lanz, C., Xiong, G., Taylor-Teeples, M., Brady, S. M., Pauly, M., Weigel, D., Usadel, B., Fernie, A. R., Peng, J., Sinha, N. R. and Maloof, J. N. (2013). Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato. Proc Natl Acad Sci U S A 110(28): E2655-2662. (These authors contributed equally to this work)
  10. Sharlach, M., Dahlbeck, D., Liu, L., Chiu, J., Jiménez-Gómez, J. M., Kimura, S., Koenig, D., Maloof, J. N., Sinha, N., Minsavage, G. V., Jones, J. B., Stall, R. E. and Staskawicz, B. J. (2013). Fine genetic mapping of RXopJ4, a bacterial spot disease resistance locus from Solanum pennellii LA716. Theor Appl Genet 126(3): 601-609.
  11. Kumar, R., Ichihashi, Y., Kimura, S., Chitwood, D. H., Headland, L. R., Peng, J., Maloof, J. N. and Sinha, N. R. (2012). A High-Throughput Method for Illumina RNA-Seq Library Preparation. Front Plant Sci 3: 202.
  12. Alakonya, A.*, Kumar, R.*, Koenig, D.*, Kimura, S.*, Townsley, B.*, Runo, S., Garces, H. M., Kang, J., Yanez, A., David-Schwartz, R., Machuka, J. and Sinha, N. (2012). Interspecific RNA interference of SHOOT MERISTEMLESS-like disrupts Cuscuta pentagona plant parasitism. Plant Cell 24(7): 3153-3166. (*These authors contributed equally to this work)
  13. Nakayama, N., Smith, R. S., Mandel, T., Robinson, S., Kimura, S., Boudaoud, A. and Kuhlemeier, C. (2012). Mechanical regulation of auxin-mediated growth. Curr Biol 22(16): 1468-1476.
  14. Nakayama, H., Nakayama, N., Nakamasu, A., Sinha, N. and Kimura, S. (2012). Toward elucidating the mechanisms that regulate heterophylly. Review Plant Morphology 24: 57-63.
  15. Uchida, N., Kimura, S., Koenig, D. and Sinha, N. (2010). Coordination of leaf development via regulation of KNOX1 genes. J Plant Res 123(1): 7-14.
  16. Kimura, S. and Sinha, N. (2008). Tomato (Solanum lycopersicum): A Model Fruit-Bearing Crop. CSH Protoc 2008: pdb emo105.
  17. Kimura, S., Koenig, D., Kang, J., Yoong, F. Y. and Sinha, N. (2008). Natural variation in leaf morphology results from mutation of a novel KNOX gene. Curr Biol 18(9): 672-677.
1 Protocol published
Detection of the Cell Proliferation Zone in Leaves by Using EdU
Authors:  Hokuto Nakayama, Kensuke Kawade, Hirokazu Tsukaya and Seisuke Kimura, date: 09/20/2015, view: 7845, Q&A: 0
Visualization of nuclei in S-phase cells in tissues is important for not only cell cycle research but also developmental research because morphogenesis is usually achieved by a combination of cell proliferation and cell expansion. Recently, DNA ...
We use cookies on this site to enhance your user experience. By using our website, you are agreeing to allow the storage of cookies on your computer.