- Home
- Protocols
-
CytoTRACE analysis in the mammary epithelial atlas paper (https://doi.org/10.1038/s42003-021-02201-2)
Last updated date: Sep 6, 2022 Views: 527 Forks: 0
Download PDF
Ask a
question
How to
cite
Favorite
Dear Dr. Yakun Pang,
Thank you for your interest in our work.
I think that the best vignette can be found at the CytoTRACE website.
(https://cytotrace.stanford.edu/)
You will find “Install R package” tab on the left. After clicking “I agree”, you will see instructions regarding installation and run.
Regarding the specific analysis in our manuscript, you can find a complete code at the Zenodo.
(https://zenodo.org/record/4674274#.Yxfr_HbP1D8)
The file is archived at “Code/Processing_Analysis/CytoTRACE.R”.
For specific functions or any further details of CytoTRACE, you may want to contact the developer at cytotrace@gmail.com.
Hope that it helps!
Best regards,
Kohei Saeki
Shiuan Chen
- Saeki, K and Chen, S(2022). CytoTRACE analysis in the mammary epithelial atlas paper (https://doi.org/10.1038/s42003-021-02201-2). Bio-protocol Preprint. bio-protocol.org/prep1906.
- Saeki, K., Chang, G., Kanaya, N., Wu, X., Wang, J., Bernal, L., Ha, D., Neuhausen, S. L. and Chen, S.(2021). Mammary cell gene expression atlas links epithelial cell remodeling events to breast carcinogenesis. Communications Biology 0(0). DOI: 10.1038/s42003-021-02201-2
Do you have any questions about this protocol?
Post your question to gather feedback from the community. We will also invite the authors of this article to respond.
Tips for asking effective questions
+ Description
Write a detailed description. Include all information that will help others answer your question including experimental processes, conditions, and relevant images.
Post a Question
