Amey Redkar Department of Genetics, University of Cordoba
21 protocols

Cynthia Monaco University of Rochester Medical Center
1 protocol

Wende Liu Chinese Academy of Agricultural Sciences
2 protocols

Reviewer
Satyabrata Nanda
  • Postdoctoral Fellow, China National Rice Research Institute
Research focus
  • Plant science
  • Plant-insect interaction, Plant-pathogen interaction, MAPK, microRNA

Education

PhD, Siksha 'O' Anusandhan University, 2016

Lab information

Fu Qiang's Lab

Publications

https://scholar.google.co.in/citations?user=aRP8yiMAAAAJ&hl=en
Research articles

Wan PJ, Zhou RN, Nanda S. et al. (2019) Phenotypic and transcriptomic responses of two Nilaparvata lugens populations to the Mudgo rice containing Bph1. Sci. Rep. 9:14049. doi: 10.1038/s41598-019-50632-z

Hussain S, Nanda S (2019) Genome-wide identification of the SPL gene family in Dichanthelium oligosanthes. Bioinformation 15(3): 165-171. doi: 10.6026/97320630015165

Hussain S, Zhu C, Bai Z, Huang J, Zhu L, Cao X, Nanda S, et al. (2019) iTRAQ-based protein profiling and biochemical analysis of two contrasting rice genotypes revealed their differential responses to salt stress. Int J Mol Sci. 20(3):547. doi: 10.3390/ijms20030547

Nanda S, Wan PJ, Yuan SY et al. (2018) Differential responses of OsMPKs in IR56 rice to two BPH populations of different virulence levels. Int J Mol Sci. 19(12):4030. doi: 10.3390/ijms19124030

Li KL, Yuan SY, Nanda S, et al. (2018) Roles of E93 and Kr-h1 on metamorphosis of Nilaparvata lugens. Front. Physiol. 9:1677. doi: 10.3389/fphys.2018.01677

Chand SK, Nanda S, Joshi RK (2018) Genetics and molecular mapping of a novel purple blotch resistance gene ApR1 in onion (Allium cepa L.) using STS and SSR markers. Mol Breed. 38:109. doi: 10.1007/s11032-018-0864-4

Mohapatra RK, Nanda S (2018) In silico analysis of onion chitinases using transcriptome data. Bioinformation. 14(8): 440-444. doi: 10.6026/97320630014440

Nanda S (2018) Mining and characterization of Allium cepa expressed sequence tags (ESTs) encoding receptor-like kinases (RLKs). Plant Omics J. 11(02):106-112. doi: 10.21475/poj.11.02.18.1250

Sinha P, Nanda S, Joshi RK et al. (2017) Development of a Sequence Tagged Site (STS) Marker for sex identification in the dioecious rattan species Calamus guruba Buch.-Ham. Mol Breed. 37(22):1-9. doi: 10.1007/s11032-017-0630-z

Chand SK, Nanda S, Mishra R, et al. (2017) Multiple garlic (Allium sativum L.) microRNAs regulate the immunity against the basal rot fungus Fusarium oxysporum f. sp. cepae. Plant Science. 257:9-21.
doi: 10.1016/j.plantsci.2017.01.007

Mishra R, Nanda S, Rout E, et al. (2017) Differential expression of defense-related genes in chili pepper infected with anthracnose pathogen Colletotrichum truncatum. Physiol Mol Plant Pathol. 97:1–10. doi: 10.1016/j.pmpp.2016.11.001

Nanda S, Chand SK, Mandal P, Tripathy P, et al. (2016) Identification of novel source of resistance and differential response of Allium genotypes to purple blotch pathogen, Alternaria porri (Ellis) Ciferri. Plant Pathol J. 32:519–527. doi: 10.5423/PPJ.OA.02.2016.0034

Chand SK, Nanda S, Joshi RK (2016) Regulation of miR394 in response to Fusarium oxysporum f. sp. cepae (FOC) infection in garlic (Allium sativum L). Front Plant Sci. 7:258. doi: 10.3389/fpls.2016.00258

Chand SK†, Nanda S†, Rout E, et al. (2016) Identification and characterization of microRNAs in turmeric (Curcuma longa L.) responsive to infection with the pathogenic fungus Pythium aphanidermatum. Physiol Mol Plant Pathol. 93:119–128. doi: 10.1016/j.pmpp.2016.01.010

Chand SK†, Nanda S†, Rout E, et al. (2016) De novo sequencing and characterization of defense transcriptome responsive to Pythium aphanidermatum infection in Curcuma longa L. Physiol Mol Plant
Pathol. 94:27–37. doi: 10.1016/j.pmpp.2016.03.008

Nanda S, Rout E, Joshi RK (2016) Curcuma longa mitogen-activated protein kinase 6 (ClMPK6) stimulates the defense response pathway and enhances the resistance to necrotrophic fungal infection. Plant Mol Biol Report. 34(5):1-13. doi: 10.1007/s11105-015-0972-9

Rout E, Nanda S, Joshi RK (2016) Molecular characterization and heterologous expression of a pathogen induced PR5 gene from garlic (Allium sativum L.) conferring enhanced resistance to necrotrophic fungi. Eur J Plant Pathol. 144:345–360. doi: 10.1007/s10658-015-0772-y

Rout E, Tripathy P, Nanda S, et al. (2016) Evaluation of cultivated and wild Allium accessions for resistance to Fusarium oxysporum f. sp. cepae. Proc Natl Acad Sci India Sect B - Biol Sci. 86:643–649. doi: 10.1007/s40011-015-0506-0

Chand SK, Nanda S, Rout E, Joshi RK (2015) Mining, characterization and validation of EST derived microsatellites from the transcriptome database of Allium sativum L. Bioinformation. 11(3):145–150.
doi: 10.6026/97320630011145

Nanda S, Nayak S, Joshi RK (2014) Molecular cloning and expression analysis of four turmeric MAP kinase genes in response to abiotic stresses and phytohormones. Biol Plant. 13(3):145-150. doi:
10.1007/s10535-014-0429-2

Bhowmick BK, Nanda S, Nayak S, et al. (2014) An APETALA3 MADS-box linked SCAR marker associated with male specific sex expression in Coccinia grandis (L). Voigt. Sci Hortic. 176:85–90. doi: 10.1016/j.scienta.2014.06.041

Rout E, Nanda S, Nayak S, Joshi RK (2013) Molecular characterization of NBS encoding resistance genes and induction analysis of a putative candidate gene linked to Fusarium basal rot resistance in Allium sativum. Physiol Mol Plant Pathol. 85:15–24. doi: 10.1016/j.pmpp.2013.11.003

Kar B, Nanda S, Nayak PK, et al. (2013) Molecular characterization and functional analysis of CzR1, a coiled-coil-nucleotide-binding-site-leucine-rich repeat R-gene from Curcuma zedoaria Loeb. that confers resistance to Pythium aphanidermatum. Physiol Mol Plant Pathol. 83:59–68. doi:
10.1016/j.pmpp.2013.05.003

Joshi RK, Nanda S, Rout E, et al. (2013) Molecular modeling and docking characterization of CzR1, a CC-NBS-LRR R-gene from Curcuma zedoaria Loeb. that confers resistance to Pythium aphanidermatum. Bioinformation. 9:560–564. doi: 10.6026/97320630009560

Nanda S, Kar B, Nayak S, et al. (2013) Development of an ISSR based STS marker for sex identification in pointed gourd (Trichosanthes dioica Roxb.). Sci Hortic. 150:11–15. doi: 10.1016/j.scienta.2012.11.009

Book chapters

Nanda S, Mohanty B, Joshi RK (2019) Endophyte mediated host stress tolerance as a means for crop improvement. Endophytes and Secondary Metabolites, Reference Series in Phytochemistry, Springer, ISBN: 9783319769004. doi:10.1007/978-3-319-76900-4_28-1

Mishra R, Nanda S, Joshi RK (2018) The CRISPR/Cas Genome editing system and its application in rice improvement. Rice Science: Biotechnological and Molecular Advancements, CRC Press, ISBN:
9781351136587.

Nanda S, Mohanty JN, Mishra R, Joshi RK (2016) Metabolic engineering of phenylpropanoids in plants. Transgenesis and Secondary Metabolism, Reference Series in Phytochemistry, Springer, ISBN: 9783319274904. doi: 10.1007/978-3-319-27490-4_30-1
3 Protocols reviewed
Preparation of Red Palm Weevil Rhynchophorus Ferrugineus (Olivier) (Coleoptera: Dryophthoridae) Germ-free Larvae for Host-gut Microbes Interaction Studies
Authors:  Abrar Muhammad, Prosper Habineza, Youming Hou and Zhanghong Shi, date: 12/20/2019, view: 1252, Q&A: 0
Red palm weevil (RPW), Rhynchophorus ferrugineus Olivier, is a devastating pest of palm trees worldwide. RPW gut is colonized by diverse bacterial species which profoundly influence host development and nutritional metabolism. However, the ...
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Real-time PCR Analysis of PAMP-induced Marker Gene Expression in Nicotiana benthamiana
Authors:  Fan Liu, Yuanpeng Xu, Yan Wang and Yuanchao Wang, date: 10/05/2018, view: 3461, Q&A: 0
Perception of pathogen-associated molecular patterns (PAMPs) often triggers various innate immune responses in plants. The transcriptional changes of defense-related genes are often used as a marker to assay PAMP-triggered plant immune response. ...
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