Sneh Singla-Pareek Plant Stress Biology, International Centre for Genetic Engineering and Biotechnology (ICGEB), India, India,
4 protocols

Ashwani Pareek Stress Physiology and Molecular Biology, School of Life Sciences, Jawaharlal Nehru University, India, India,
4 protocols

Reviewer
Dr. Amit K. Tripathi
  • Faculty, ICMR-National Institute for Research in Environmental Health
Research focus
  • Molecular biology
  • Epigenetics, Toxicology, Genotoxicity
  • 1 Author merit

Education

Ph.D., International Centre for Genetic Engg and Biotechnology (ICGEB), 2017

Lab information

Molecular Biology Laboratory

Publications

1. Tripathi AK, Pareek, A, Singla-Pareek, S. L. TUNEL assay to assess extent of DNA fragmentation and programmed cell death in root cells under various stress conditions. Bio-protocol, 2017; 7(16): e2502.
2. Tripathi AK, Pareek A, Singla-Pareek SL. A NAP-family histone chaperone functions in abiotic stress response and adaptation. Plant Physiol., 2016; 171:2854-2868. PubMed PMID: 27342307 [Impact Factor: 5.95].
3. Tripathi AK, Singh K, Pareek A, Singla-Pareek SL. Histone chaperones in Arabidopsis and rice: genome-wide identification, phylogeny, architecture and transcriptional regulation. BMC Plant Biol. 2015;12; 15:42. PubMed PMID: 25849155 [Impact Factor: 3.93].
4. Tripathi AK, Pareek A, Sopory SK, Singla-Pareek SL. Narrowing down the targets for yield improvement in rice under normal and abiotic stress conditions via expression profiling of yield-related genes. Rice(NY), 2012; 5:37. PubMed PMID: 24280046 [Impact Factor: 3.74].
5. Kaur C, Tripathi AK, Nutan KK, Sharma S, Ghosh A, Tripathi JK, Pareek A, Singla-Pareek SL, Sopory SK. A nuclear-localized rice glyoxalase I enzyme, OsGLYI-8, functions in the detoxification of methylglyoxal in the nucleus. The Plant Journal, 2017; 89(3):565-576. PubMed PMID: 27797431.[Impact Factor: 5.78].
6. Joshi R, Sahoo KK, Tripathi AK, Kumar R, Gupta BK, Pareek A, Singla-Pareek SL. Knockdown of an inflorescence meristem-specific cytokinin oxidase – OsCKX2 in rice reduces yield penalty under salinity stress condition. Plant, Cell & Environment, 2018; 41:936-946. PubMed PMID: 28337744. [Impact Factor: 5.42]
7. Gupta BK, Sahoo KK, Ghosh A, Tripathi AK, Anwar K, Das P, Singh AK, Pareek A, Sopory SK, Singla-Pareek SL. Manipulation of glyoxalase pathway confers tolerance to multiple stresses in rice. Plant, Cell & Environment, 2018; 41(5):1186-1200. PubMed PMID: 28425127 [Impact Factor: 5.42].
8. Kumari S, Joshi R, Singh K, Roy S, Tripathi AK, Singh P, Singla-Pareek SL, Pareek A. Expression of a cyclophilin OsCyp2-P isolated from a salt-tolerant landrace of rice in tobacco alleviates stress via ion homeostasis and limiting ROS accumulation. Functional and Integrative Genomics, 2015; 15(4):395-412. PubMed PMID: 25523384 [Impact Factor: 3.89].
9. Singh AK, Kumar R, Tripathi AK, Gupta B, Pareek A, Singla-Pareek SL. Genome-wide investigation and expression analysis of Sodium/Calcium exchanger gene family in rice and Arabidopsis. Rice(NY). 2015; 8:21 PubMed PMID: 26134707 [Impact Factor: 3.74].
10. Gupta B, Tripathi AK, Joshi R, Pareek A, Singla-Pareek SL. Designing climate-smart future crops employing signal transduction components. In Elucidation of Abiotic Stress Signaling in Plants 2015 (pp. 393-413). Springer, New York, NY. [ISBN: 978-1-4939-2210-9]
11. Mustafiz A, Ghosh A, Tripathi AK, Kaur C, Ganguly AK, Bhavesh NS, Tripathi JK, Pareek A, Sopory SK, Singla-Pareek SL. A unique Ni2+-dependent and methylglyoxal-inducible rice glyoxalase I possesses a single active site and functions in abiotic stress response. The Plant Journal, 2014 78(6):951-63. PubMed PMID: 24661284 [Impact Factor: 5.78].
12. Sahoo KK, Tripathi AK, Pareek A, Singla-Pareek SL. Taming drought stress in rice through genetic engineering of transcription factors and protein kinases. Plant Stress, 2013; 7:60–72. [ISSN: 1749-0359].
13. Sahoo KK, Tripathi AK, Pareek A, Sopory SK, Singla-Pareek SL. An improved protocol for efficient transformation and regeneration of diverse indica rice cultivars. Plant Methods (BMC), 2011 30;7(1): 49. PubMed PMID: 22206592 [Impact Factor: 4.27].
1 Protocol published
TUNEL Assay to Assess Extent of DNA Fragmentation and Programmed Cell Death in Root Cells under Various Stress Conditions
Authors:  Amit K. Tripathi, Ashwani Pareek and Sneh Lata Singla-Pareek, date: 08/20/2017, view: 3925, Q&A: 0
DNA damage is one of the common consequences of exposure to various stress conditions. Different methods have been developed to accurately assess DNA damage and fragmentation in cells and tissues exposed to different stress agents. However, owing to ...
1 Protocol reviewed
RNA Immunoprecipitation Assay to Determine the Specificity of SRSF3 Binding to Nanog mRNA
Authors:  Madara Ratnadiwakara and Minna-Liisa Änko, date: 11/05/2018, view: 111, Q&A: 0
Mammalian cells express hundreds of RNA binding proteins (RBPs) that are essential regulators of RNA metabolism. RBP activity plays a central role in the control of gene expression programs and identification of RNA-protein interactions is critical ...
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