Armin Djamei 2 protocols

Carmen Czepe 1 protocol

Heinz Ekker 1 protocol

Franziska Rabe 1 protocol

Angelika B Czedik-Eysenberg
  • Gregor Mendel Institute, Austrian Academy of Sciences, Vienna Biocenter (VBC), Dr. Bohr-Gasse 3, Austria
  • 1 Author merit


Dr., Universität Potsdam, Germany, 2012

Current position

PostDoc, Djamei group, Gregor-Mendel-Institute, Austria, 2014-2017


  1. Rabe, F., Bosch, J., Stirnberg, A., Guse, T., Bauer, L., Seitner, D., Rabanal, F. A., Czedik-Eysenberg, A., Uhse, S., Bindics, J., Genenncher, B., Navarrete, F., Kellner, R., Ekker, H., Kumlehn, J., Vogel, J. P., Gordon, S. P., Marcel, T. C., Munsterkotter, M., Walter, M. C., Sieber, C. M., Mannhaupt, G., Guldener, U., Kahmann, R. and Djamei, A. (2016). A complete toolset for the study of Ustilago bromivora and Brachypodium sp. as a fungal-temperate grass pathosystem. Elife 5.
  2. Czedik-Eysenberg, A., Arrivault, S., Lohse, M. A., Feil, R., Krohn, N., Encke, B., Nunes-Nesi, A., Fernie, A. R., Lunn, J. E., Sulpice, R. and Stitt, M. (2016). The Interplay between Carbon Availability and Growth in Different Zones of the Growing Maize Leaf. Plant Physiol 172(2): 943-967.
  3. Rabe, F., Seitner, D., Bauer, L., Navarrete, F., Czedik-Eysenberg, A., Rabanal, F. A. and Djamei, A. (2016). Phytohormone sensing in the biotrophic fungus Ustilago maydis - the dual role of the transcription factor Rss1. Mol Microbiol 102(2): 290-305.
  4. Wang, L., Czedik-Eysenberg, A., Mertz, R. A., Si, Y., Tohge, T., Nunes-Nesi, A., Arrivault, S., Dedow, L. K., Bryant, D. W., Zhou, W., Xu, J., Weissmann, S., Studer, A., Li, P., Zhang, C., LaRue, T., Shao, Y., Ding, Z., Sun, Q., Patel, R. V., Turgeon, R., Zhu, X., Provart, N. J., Mockler, T. C., Fernie, A. R., Stitt, M., Liu, P. and Brutnell, T. P. (2014). Comparative analyses of C(4) and C(3) photosynthesis in developing leaves of maize and rice. Nat Biotechnol 32(11): 1158-1165.
  5. Riedelsheimer, C., Lisec, J., Czedik-Eysenberg, A., Sulpice, R., Flis, A., Grieder, C., Altmann, T., Stitt, M., Willmitzer, L. and Melchinger, A. E. (2012). Genome-wide association mapping of leaf metabolic profiles for dissecting complex traits in maize. Proc Natl Acad Sci U S A 109(23): 8872-8877.
  6. Riedelsheimer, C., Czedik-Eysenberg, A., Grieder, C., Lisec, J., Technow, F., Sulpice, R., Altmann, T., Stitt, M., Willmitzer, L. and Melchinger, A. E. (2012). Genomic and metabolic prediction of complex heterotic traits in hybrid maize. Nat Genet 44(2): 217-220.
  7. Usadel, B., Poree, F., Nagel, A., Lohse, M., Czedik-Eysenberg, A. and Stitt, M. (2009). A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, Maize. Plant Cell Environ 32(9): 1211-1229.
1 Protocol published
Overrepresentation Analyses of Differentially Expressed Genes in the Smut Fungus Ustilago bromivora during Saprophytic and in planta Growth
Authors:  Angelika Czedik-Eysenberg, Franziska Rabe, Heinz Ekker, Carmen Czepe and Armin Djamei, date: 08/05/2017, view: 2331, Q&A: 0
We have established the Ustilago bromivoraBrachypodium spp. interaction as a new model pathosystem for biotrophic fungal plant infections of the head smut type (Rabe et al., 2016). In this protocol, the methodology used ...