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Coauthors
Dominique Payet-Bornet Centre d'Immunology de Marseille Luminy (CIML), Aix-Marseille UM2, INSERM UMR1104, CNRS UMR7280, France
2 protocols

Saida Dadi The National Center for Scientific Research
2 protocols

Pierre Ferrier
  • Centre d'Immunology de Marseille Luminy (CIML), Aix-Marseille UM2, INSERM UMR1104, CNRS UMR7280, France
  • 2 Author merit

Education

PhD in Biochemistry, Haematology & Immunology, Aix-Marseille University

Current position

Research Director
Centre d’Immunologie de Marseille-Luminy (CIML); Aix-Marseille University, UM2; Institut National de la Santé et de la Recherche Médicale (Inserm) U1104; Centre National de la Recherche Scientifique (CNRS) UMR7280; Marseille, France

Publications (since 2005)

  1. Jaeger, S., Fernandez, B. and Ferrier, P.*. (2013). Epigenetic aspects of lymphocyte antigen receptor gene rearrangement or 'when stochasticity completes randomness'. Immunology 139(2): 141-150.
  2. Dadi, S., Le Noir, S., Payet-Bornet, D., Lhermitte, L., Zacarias-Cabeza, J., Bergeron, J., Villarese, P., Vachez, E., Dik, W. A., Millien, C., Radford, I., Verhoeyen, E., Cosset, F. L., Petit, A., Ifrah, N., Dombret, H., Hermine, O., Spicuglia, S., Langerak, A. W., Macintyre, E. A., Nadel, B., Ferrier, P.*. and Asnafi, V. (2012). TLX homeodomain oncogenes mediate T cell maturation arrest in T-ALL via interaction with ETS1 and suppression of TCRalpha gene expression. Cancer Cell 21(4): 563-576.
  3. Preto, J., Floriani, E., Nardecchia, I., Ferrier, P.*. and Pettini, M. (2012). Experimental assessment of the contribution of electrodynamic interactions to long-distance recruitment of biomolecular partners: Theoretical basis. Phys Rev E Stat Nonlin Soft Matter Phys 85(4 Pt 1): 041904.
  4. Cauchy, P., Benoukraf, T. and Ferrier, P.*. (2011). Processing ChIP-chip data: from the scanner to the browser. Methods Mol Biol 719: 251-268.
  5. Koch, F., Fenouil, R., Gut, M., Cauchy, P., Albert, T. K., Zacarias-Cabeza, J., Spicuglia, S., de la Chapelle, A. L., Heidemann, M., Hintermair, C., Eick, D., Gut, I., Ferrier, P.*. and Andrau, J. C. (2011). Transcription initiation platforms and GTF recruitment at tissue-specific enhancers and promoters. Nat Struct Mol Biol 18(8): 956-963.
  6. de Almeida, S. F., Grosso, A. R., Koch, F., Fenouil, R., Carvalho, S., Andrade, J., Levezinho, H., Gut, M., Eick, D., Gut, I., Andrau, J. C., Ferrier, P.*. and Carmo-Fonseca, M. (2011). Splicing enhances recruitment of methyltransferase HYPB/Setd2 and methylation of histone H3 Lys36. Nat Struct Mol Biol 18(9): 977-983.
  7. Pekowska, A., Benoukraf, T., Zacarias-Cabeza, J., Belhocine, M., Koch, F., Holota, H., Imbert, J., Andrau, J. C., Ferrier, P.*. and Spicuglia, S. (2011). H3K4 tri-methylation provides an epigenetic signature of active enhancers. EMBO J 30(20): 4198-4210.
  8. Farcot, E., Bonnet, M., Jaeger, S., Spicuglia, S., Fernandez, B. and Ferrier, P.*. (2010). TCR beta allelic exclusion in dynamical models of V(D)J recombination based on allele independence. J Immunol 185(3): 1622-1632.
  9. Pekowska, A., Benoukraf, T., Ferrier, P.*. and Spicuglia, S. (2010). A unique H3K4me2 profile marks tissue-specific gene regulation. Genome Res 20(11): 1493-1502.
  10. Spicuglia, S., Pekowska, A., Zacarias-Cabeza, J. and Ferrier, P.*. (2010). Epigenetic control of Tcrb gene rearrangement. Semin Immunol 22(6): 330-336. (Review).
  11. Benoukraf, T., Cauchy, P., Fenouil, R., Jeanniard, A., Koch, F., Jaeger, S., Thieffry, D., Imbert, J., Andrau, J. C., Spicuglia, S. and Ferrier, P.* (2009). CoCAS: a ChIP-on-chip analysis suite. Bioinformatics 25(7): 954-955.
  12. Bonnet, M., Huang, F., Benoukraf, T., Cabaud, O., Verthuy, C., Boucher, A., Jaeger, S., Ferrier, P.*. and Spicuglia, S. (2009). Duality of enhancer functioning mode revealed in a reduced TCR beta gene enhancer knockin mouse model. J Immunol 183(12): 7939-7948.
2 Protocols published
Co-Streptavidin Precipitation
Authors:  Saïda Dadi, Dominique Payet-Bornet and Pierre Ferrier, date: 02/05/2013, view: 6419, Q&A: 0
Co-Streptavidin Precipitation (Co-SP) is a method to pull down protein partners of a protein of interest tagged with the streptavidin binding protein domain, and using streptavidin columns that specifically bind to Streptavidin Binding Protein (SBP) ...
ImmunoPrecipitation of Nuclear Protein with Antibody Affinity Columns
Authors:  Saïda Dadi, Dominique Payet-Bornet and Pierre Ferrier, date: 02/05/2013, view: 18663, Q&A: 1
Co-Immunoprecipitation (Co-IP) is the method used to pull down protein partners of a protein of interest using an antibody that specifically binds to this specific protein in order to test protein-protein interaction. “Pulled down” proteins can be ...