Please see the paper: Cell Painting, a high-content image-based assay for morphological profiling using multiplexed fluorescent dyes
Mark-Anthony Bray, Shantanu Singh, Han Han, Chadwick T Davis, Blake Borgeson, Cathy Hartland, Maria Kost-Alimova, Sigrun M Gustafsdottir, Christopher C Gibson & Anne E Carpenter
Nature Protocols volume 11, pages1757–1774 (2016)
And the associated wiki page related to the paper: https://github.com/carpenterlab/2016_bray_natprot/wiki#updates-to-the-cell-painting-protocol
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