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Dimensionality reduction and clustering

DM Dingbang Ma
DP Dariusz Przybylski
KA Katharine Abruzzi
MS Matthias Schlichting
QL Qunlong Li
XL Xi Long
MR Michael Rosbash

Last updated date: Feb 11, 2021 Views: 1066 Forks: 0

original An abbreviated version of this protocol was published in eLife in Jan, 2021
A transcriptomic taxonomy of Drosophila circadian neurons around the clock
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The code we used for dimensionality reduction, clustering and rhythmic gene expression analysis has been deposited in GitHub (https://github.com/rosbash- lab/scRNA_seq_clock_neurons). 

 

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How to cite：
Readers should cite both the Bio-protocol preprint and the original research article where this protocol was used:
  1. Ma, D, Przybylski, D, Abruzzi, K, Schlichting, M, Li, Q, Long, X and Rosbash, M(2021). Dimensionality reduction and clustering. Bio-protocol Preprint. bio-protocol.org/prep833.
  2. Ma, D., Przybylski, D., Abruzzi, K. C., Schlichting, M., Li, Q., Long, X. and Rosbash, M.(2021). A transcriptomic taxonomy of Drosophila circadian neurons around the clock. eLife. DOI: 10.7554/eLife.63056

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