Sections stored in PBS-azide should be rinsed with PBS 2x’s for 10 min. ea. Sections stored in cryoprotectant should be rinsed with PBS 6x’s for 10 min. ea.
Incubate in 1% NaOH and 1% H2O2 for 20 min. (300ml 30% NaOH and 300ml 30% H2O2 in 10ml ddH2O)
Rinse in PBS 3x’s for 10 min. ea.
Incubate in 0.3% Glycine for 10 min. (0.03gm glycine in 10ml PBS – IMPORTANT make fresh just before use!)
Rinse in PBS 3x’s for 10 min. ea.
Incubate in 0.03% SDS for 10 min. (30ml 10% SDS in 10ml PBS)
Block in PBT-Azide w/ 3% Normal Serum [e.g. If Normal Serum was Donkey, the solution would be abbreviated PDT; for Normal Goat Serum, PGT] (300ml Normal Serum in 10ml PBT).
Transfer sections into primary antibody and incubate at room temp. (or at 4oC in cold room) on shaker ~50 rpm. (primary antibody + 3% normal serum + PBT-Azide) [anti-pSTAT3 antibody from Cell Signaling is diluted 1:4,000, incubate on shaker at rm. temp for 24 hours and then put in 4 oC for 24-48 hours]
Rinse with PBS 6x’s for 10 min. ea.
Transfer sections into secondary antibody for 1-2 hours on shaker ~50 rpm. [1:1000 for biotinylated-Jackson or -Vector] (10ml of secondary antibody + 300ml normal serum + 10ml PBT)
Rinse with PBS 3x’s for 10 min. ea.
Incubate in ABC* (Avidin Biotin Complex) for 1 hour.
Rinse with PBS 2x’s for 10 min. ea.
Incubate in 0.04% DAB and 0.01% H2O2 ~4-6 min. (500ml DAB [+ 100ml 5% Cobalt Chloride +
500ml 1% Nickel Sulfate] + 50ml PBS; just before use add 16ml of 30% H2O2)
Rinse with PBS 2x’s for 10 min. ea.
Go on to next primary or store sections in PBS-Azide and/or mount onto gelatin coated slides.
* All steps done at room temperature on orbital shaker at a speed of ~30 rpm unless otherwise noted.