Seed 1 x 10^6 MCF7 cells/ per well in 6 well plate in DMEM with 10% FBS and incubate at 37C for 24 hours in 5% CO2 incubator.
MCF7 cells were transfected with SMAR1 siRNA and control siRNA by lipofectamine RNAiMaxTM (Ambion) according to the manufacturer’s protocol. Amount of siRNA and lipofectamine RNAiMaxTM are used as mentioned in the table:
ul
siRNA per well
25 pmol
lipofectamine RNAiMaxTM
7.5 ul
2-NBDG treatment followed by FACS analysis:
After 24 h of transfection, media was removed and replenished with 10% FBS containing DMEM (without glucose and sodium pyruvate) and incubated at 37 °C for 1 h.
10 μM fluorescent d-glucose analog 2-[N-(7-nitrobenz-2-oxa-1,3-diazol-4-yl)amino]-2-deoxy-d-glucose (2-NBDG) (Invitrogen) was added to culture media and cells were incubated for 1 h at 37 °C.
The 2-NBDG uptake reaction was stopped by removing the incubation medium and the cells were washed with ice-cold 1× PBS.
Cells were harvested by trypsinization followed by washing with ice cold 1x PBS. (Repeat the washing twice).
Cells were divided in two tubes and centrifuged at 2000 RPM for 3 mins at 4C.
One tube was used for western blot to confirm the knockdown.
Remaining tube was further resuspended in 500 ul of ice cold 1x PBS.
1 μg/ml propidium iodide (PI) was added to distinguish the viable cell population before the FACS analysis.
For each measurement, data from 10,000 single-cell events were collected using FACS Canto II (BD Bioscience).
The percentage of 2-NBDG uptake was calculated from mean fluorescence intensity (MFI) compared with the control.
Copyright: Content may be subjected to copyright.
How to cite:
Readers should cite both the Bio-protocol preprint and the original research article where this protocol was used:
Choksi, A and Chattopadhyay, S(2022). Glucose (2-NBDG) uptake assay. Bio-protocol Preprint. bio-protocol.org/prep1948.
Choksi, A., Parulekar, A., Pant, R., Shah, V. K., Nimma, R., Firmal, P., Singh, S., Kundu, G. C., Shukla, S. and Chattopadhyay, S.(2021). Tumor suppressor SMAR1 regulates PKM alternative splicing by HDAC6-mediated deacetylation of PTBP1. Cancer & Metabolism 0(0). DOI: 10.1186/s40170-021-00252-x
Do you have any questions about this protocol?
Post your question to gather feedback from the community. We will also invite the authors of this
article to respond.
0/150
Tips for asking effective questions
+ Description
Write a detailed description. Include all information that will help others answer your question including experimental processes, conditions, and relevant images.
Spinning
Post a Question
0 Q&A
Spinning
This protocol preprint was submitted via the "Request
a Protocol" track.