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Testing the predictors of genomic divergence

LM Lukas J. Musher

Last updated date: Jun 24, 2022 Views: 565 Forks: 0

original An abbreviated version of this protocol was published in Science Advances in Apr, 2022
River network rearrangements promote speciation in lowland Amazonian birds
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Hi,

 

Our scripts are available on Github at this link: https://github.com/lukemusher/Southern_Amazon_cophylogeography/tree/main/Commonality%20Analysis

 

But our scripts are adapted directly from the scripts in Prunier et al (the reference you mention). So I suggest looking at the Prunier et al. scripts which are also available online, I believe in their Dryad repository.

 

Good luck, and feel free to contact me with additional questions.

 

Luke

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How to cite：
Readers should cite both the Bio-protocol preprint and the original research article where this protocol was used:
  1. Musher, L(2022). Testing the predictors of genomic divergence. Bio-protocol Preprint. bio-protocol.org/prep1739.
  2. Musher, L. J., Giakoumis, M., Albert, J., Del-Rio, G., Rego, M., Thom, G., Aleixo, A., Ribas, C. C., Brumfield, R. T., Smith, B. T. and Cracraft, J.(2022). River network rearrangements promote speciation in lowland Amazonian birds. Science Advances 8(14). DOI: 10.1126/sciadv.abn1099

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