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UCSF Chimera protein mapping.
DOI: 10.21769/BioProtoc.v152 Published: Mar 20, 2018 Views: 4457
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Walkthrough showing how to format data to map onto a 3D protein structure in UCSF Chimera. Walkthrough also shows the correct menus to select to map data onto the structure, as well as how to set up a color gradient and specify what colors to use.
Extracted from protocol
Hydrogen Deuterium Exchange Mass Spectrometry of Oxygen Sensitive Proteins
Berry, L., Patterson, A., Pence, N., Peters, J. W. and Bothner, B. (2018). Bio-protocol 8(6): e2769.
DOI: 10.21769/BioProtoc.2769.
Walkthrough showing how to format data to map onto a 3D protein structure in UCSF Chimera. Walkthrough also shows the correct menus to select to map data onto the structure, as well as how to set up a color gradient and specify what colors to use.
Extracted from protocol
Hydrogen Deuterium Exchange Mass Spectrometry of Oxygen Sensitive Proteins
Berry, L., Patterson, A., Pence, N., Peters, J. W. and Bothner, B. (2018). Bio-protocol 8(6): e2769.
DOI: 10.21769/BioProtoc.2769.
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Keywords
HDX-MS, Mass spectrometry, Anaerobic proteins, H/D exchange, Protein dynamics, Protein-protein interactions, Protein-ligand interactions
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