Hi, I am not able to run the script from line1 to line 54. I...

MT
Mehak Taneja
May 12, 2021
protocol Protocol: A Simple Protocol for Informative Visualization of Enriched Gene Ontology Terms
Hi, I am not able to run the script from line1 to line 54. I am probably getting an error in location of the working directory. I set the location of the file but it displays the error; cannot locate 'GO_all'. If you can kindly help me with this?
Please find attached here the screensh
img Read more Read less more less
answer Answer
recommend recommend recommend recommend Recommend
follow follow follow follow Follow
share share Share
1 answer
Sort by: most helpful / most recent

Titouan Bonnot Author Answered May 13, 2021

INRAE - Dijon, Agroecology

Hello,
You got this error because the working directory is incorrect. You probably got another error message before this one, saying "... cannot change working directory". The working directory should end with the subfolder where your data files are. Please use the following code on line 10 of the R script (assuming that your files are in your subfolder "Bioprotocol"):
setwd("/Users/mehaktaneja/Desktop/Bioprotocol/")
Then, the code should work. If not, please let me know.
Thanks,
Titouan
0 helpful
0 unhelpful
comment 0 comments down up
share Share

My answer

Write your answer...

References (optional)

add Add more

post Post an Answer