HiSupplementary Data S3 is corrupted. Could you please correct...

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mrb
Jan 18, 2020
protocol Protocol: A Simple Protocol for Informative Visualization of Enriched Gene Ontology Terms
Hi
Supplementary Data S3 is corrupted. Could you please correct this file.

Thx
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Titouan Bonnot Author Answered May 15, 2020

INRAE - Dijon, Agroecology

Hello,
It seems that some users get the following error message when running the R script "Supplementary Data 3":
'Error: Guide with class guide / legend does not implement guide_transform(). Did you mean to use guide_axis()?'.
It does not occur with everyone. If this happens to you, please remove from the R script (Supplementary Data 3) the code on lines 53 and 54 and remove the '+' at the end of the command 'labs(color="-log10(FDR)", size="Number\nof genes")+' on line 52. Remove the same code on lines 115 and 116 and the '+' on line 114 as well.
We are currently in contact with the editorial team to provide an updated version of this Supplementary Data 3.
We sincerely apologize for the inconvenience.
Thank you,

Titouan Bonnot
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Titouan Bonnot Author Answered May 8, 2020

INRAE - Dijon, Agroecology

Hello,
Sorry to hear that you are having difficulties to download the files. As mentioned in the responses above, the Supplementary Data S3 is not corrupted and the problem probably comes from the conversion of the .rar file.
Please don't hesitate to contact me at tbonnot@ucr.edu if you still have difficulties in accessing the files. I can directly send you these files.
Thank you,
Titouan Bonnot
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Chakkiath Paul Antony Answered May 3, 2020

King Abdullah University of Science and Technology

Supplementary Data S3 is not corrupted. That rar file needs to be converted into a zip folder (you can do it online if you don't have a converter)
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mrb Answered Jan 20, 2020

teh uni

Thanks for your response. I know that this file is compressed but the problem is that the compressed file is corrupted and nothings can be extracted. I tried several times. If possible replace it with a corrected file or original script without compression.

Regards
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mrb Answered Jan 20, 2020

teh uni

Thanks for bringing this issue. The "Supplementary Data S3" is the script file for R (or RStudio). It's saved and uploaded here in a compressed file (.RAR format). You may need to extract the original script file first. Hope it helps with your question.
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