Hello, great work. Can you please clarify if i can proceed with MSU ids as i don't have RAP-DB ids and also don't have access to get RAP-DB ids.

Hi, thanks for the question. You can use the protocol with MSU ids and the only extra work is to convert the MSU ids into RAP ids. A good source for id conversion is right at the RAP-DB database: https://rapdb.dna.affrc.go.jp/converter/

After the conversion, you can follow the protocol to do GO and KEGG analysis.

Please reach me if you have any further questions at yahuili2009@gmail.com