Protocols for preparing CTX buffer (5 mM KH2PO4/K2HPO4 pH 6.0, 1mM CaCl2, 1mM MgSO4, and 50mM NaCl. Odors were diluted in CTX and the osmolarity of these solutions was adjusted with sorbitol to 350 mOsm/L to match the internal osmotic pressure of C. elegans and prevent osmotic shock.
CTX buffer protocol:
Materials
DI water
Pipette
Laboratory scale
Stir bar
pH meter
1 M KPO4 buffer (KH2PO4/K2HPO4 pH 6.0)
1 M CaCl2
1 M MgSO4
NaCl
Sorbitol
Osmometer
*All salts were sourced from Sigma Aldrich. Sorbitol was sourced from Alfa Aesar.
- If not already on hand, first separately prepare the following solutions: 1 M CaCl2, 1 M MgSO4, and 1 M KPO4 buffer (KH2PO4/K2HPO4, with a measured pH of 6.0).
- To make 1 L of CTX buffer with no sorbitol, first add 500 mL DI water to a suitable container. Use a pipette to add 5 mL 1 M KPO4 buffer, 1 mL 1 M CaCl2, 1 mL 1 M MgSO4, and 0.05 mole NaCl (2.92 g). Then add DI water until the solution reaches 1 L total volume.
- Stir to dissolve the salt. CTX is stable prior to the addition of sorbitol.
- To prepare a small quantity CTX buffer with sorbitol in preparation for odorant dilution, first compute the required amount of sorbitol to achieve the desired osmolarity.
- Most odorants are nonionic compounds and thus only contribute 1 osmole of solute per 1 mole of solute. For salts, this ratio changes.
- Use an osmometer to measure the osmolarity of the CTX buffer without sorbitol (~125 mOsm/L).
- Add to the buffer osmolarity add the osmolarity contributed by the concentration of the odorant (negligible at low dilutions), then determine the amount of sorbitol (182.17 g/mol) necessary to bring the total osmolarity to 350 mOsm/L when the contributions of the CTX buffer, odorant, and sorbitol are combined. In the case that the odorant concentration is negligible, sorbitol should be added at ~225 mM (40.9 g/L).
- To prepare 200 mL of CTX buffer with sorbitol, combine 200 mL of prepared CTX buffer with the requisite amount of sorbitol. Stir until the sorbitol has completely dissolved.
- Confirm with an osmometer that the final osmolarity of the solution is correct.
Odor dilution protocol:
Materials
DI water
Pipette
Micropipettes
Pure soluble odorants (liquid form)
CTX buffer with sorbitol
Glass bottles for odorant storage
*All pure odorants were sourced from Sigma Aldrich. Refer to the supplement of Lin et al., 2023 for a full listing of the odors used.
- Use a pipette to add 10 mL CTX buffer with sorbitol in a clean glass bottle. Use a micropipette to add 1 uL pure odorant to the bottle (10-4 dilution). Stir thoroughly to combine. Let any bubbles that may have formed during the stirring process settle before proceeding.
- Perform serial dilution: In a second glass bottle, add 9 mL CTX buffer with sorbitol. Add from the first bottle 1 mL of 10-4 dilution and stir well. This makes the 10-5 dilution.
- Repeat the serial dilution until you reach the desired minimum concentration. Note that if you are spanning a large range of concentrations, the amount of sorbitol may change. Thus, you may have to prepare different CTX + sorbitol buffers for different concentrations.
- To minimize odorant cross-contamination, glass bottles were not reused for different odors or different concentrations. Odor solutions not consumed in experiments were replaced after 2 weeks to mitigate changes in odor solution concentration due to evaporation of volatile compounds. Particularly volatile odorants were replaced even more frequently.