3.1.2. General Procedure for Sonogashira Cross-Coupling Reaction

LW Lisa Wolff
SB Siva Sankar Murthy Bandaru
EE Elias Eger
HL Hoai-Nhi Lam
MN Martin Napierkowski
DB Daniel Baecker
CS Carola Schulzke
PB Patrick J. Bednarski
request Request a Protocol
ask Ask a question
Favorite

A 25 mL oven-dried Schlenk tube was charged with 2 mol % of palladium (II) acetate (Pd(OAc)2), 5 mol % of phosphine ligand (PPh3) or PdCl2(PPh3)2 (2–3 mol %), 3 mol % copper(I) iodide (CuI), and 1–2 mmol of chloro- or bromo-heterocyclic derivative under nitrogen (N2) atmosphere, and the resultant mixture was dissolved in 5 mL of dry ACN or DMF. The reaction mixture was stirred for 5 min and supplied with 2 equiv. of 3,3′-diethoxy propyne and 5 equiv. of TEA or DIPEA. This was followed by stirring at 60 °C for 3–4 h. After consumption of the starting materials (monitored by TLC/TLC-MS), the solvent was removed under vacuum, and the residue was purified by column chromatography in hexane/EtOAc (10% to 30%) solvent system to afford the desired product.

The general procedure for Sonogashira coupling was applied using C (0.50 g, 1.64 mmol) yielding D as red oil in 62% (0.357 g, 1.017 mmol) yield. 1H NMR (300 MHz, DMSO-d6) δ: 1.20 (t, J = 7.18 Hz, 6 H), 3.56–3.66 (m, 2 H), 3.66–3.79 (m, 2 H), 3.84 (s, 3 H), 5.60 (s, 1 H), 7.00–7.13 (m, 3 H), 7.99 (d, J = 8.69 Hz, 2 H), 8.33 (s, 1 H), 12.63 (br s, 1 H).

The general procedure for the Sonogashira reaction was applied using “X a” (1.94 g, 7.16 mmol), yielding the product as reddish-brown oil. The formation of “Y a” was confirmed by (+ve) APCI-MS m/z = 316.18 [M] calcd. for C18H24N2O3 [M], found: 317.22 m/z [M+H]. Without further purification, compound “Y a” was used in the next reaction.

Spectral data of the compound are in agreement with previous reports [48]. The general procedure for the Sonogashira reaction was applied using “X b” (1.00 g, 3.68 mmol) yielding the product as dark red liquid in 73% (0.85 g, 2.68 mmol) yield. 1H NMR (300 MHz, CDCl3) δ: 0.97–1.29 (m, 6 H), 2.67–2.71 (m, 2 H), 3.51–3.77 (m, 10 H), 5.40 (s, 1 H), 7.44 (d, J = 8.31 Hz, 1 H), 7.65 (dd, J = 7.74 Hz, 2.08 Hz, 1 H), 7.89 (s, 1 H); 13C NMR (75 MHz, CDCl3) δ: 14.4 (s, 1 C), 20.3 (s, 1 C), 30.7 (s, 1 C), 35.7 (s, 1 C), 37.9 (s, 1 C), 60.6 (s, 1 C), 66 (s, 1 C), 82.8 (s, 1 C), 85.1 (s, 1 C), 90.8 (s, 1 C), 126.4 (s, 1 C), 129.8 (s, 1 C), 134.7 (s, 1 C), 142.7 (s, 1 C), 147.6 (s, 1 C), 161.8 (s, 1 C), 166.4 (s, 1 C); (+ve) APCI-MS m/z = 318.16 [M] calcd. for C17H22N2O4 [M], found: 319.16 m/z [M+H].

The spectral data of compound “Y c” are in agreement with the literature [48]. The general procedure for the Sonogashira reaction was applied using “X c” (1.00 g, 3.89 mmol) yielding the product as reddish oil in 78% (0.923 g, 3.03 mmol) yield. 1H NMR (300 MHz, CDCl3) δ: 1.14 (t, J = 6.99 Hz, 12 H), 3.13 (br s, 2 H), 3.43 (br s, 2 H), 3.49–3.61 (m, 2 H), 3.64–3.76 (m, 2 H), 5.38 (s, 1 H), 7.38–7.43 (m, 1 H), 7.58 (dd, J = 8.12 Hz, 2.08 Hz, 1 H), 8.47 (s, 1 H); 13C NMR (75 MHz, CDCl3) δ: 14.7 (s, 1 C), 20.6 (s, 1 C), 31 (s, 1 C), 36.1 (s, 1 C), 39.3 (s, 1 C), 43.1 (s, 1 C), 60.9 (s, 1 C), 83.3 (s, 1 C), 85 (s, 1 C), 91.2 (s, 1 C), 126.7 (s, 1 C), 132 (s, 1 C), 134.2 (s, 1 C), 142.4 (s, 1 C), 147.2 (s, 1 C), 162.1 (s, 1 C), 167.5 (s, 1 C); (+ve) APCI-MS m/z = 304.18 [M] calcd. for C17H24N2O3 [M], found: 305 m/z [M+H].

The general procedure for the Sonogashira coupling was applied using “X d” (0.39 g, 1.00 mmol), yielding the product as a red oil. The formation of “Y d” was confirmed by (+ve) APCI-MS m/z = 439.48 m/z [M] calcd. for C24H26FN3O4 [M], found: 440.1 m/z [M+H]. The product was used further without additional purification.

The general procedure for the Sonogashira reaction was applied using “X e” (0.425 g, 1.00 mmol), yielding the product as a red liquid. The formation of “Y e” was confirmed by (+ve) APCI-MS m/z = 471.18 m/z [M] calcd. for C24H29N3O5S [M], found: 472.1 m/z [M+H]. The product was used further without additional purification.

Do you have any questions about this protocol?

Post your question to gather feedback from the community. We will also invite the authors of this article to respond.

post Post a Question
0 Q&A