Improve Research Reproducibility A Bio-protocol resource
- Home
- Protocols
-
Concise Method
Prediction of Target Genes of the DE-miRNAs
Request a Protocol
Ask a
question
Favorite
The V7.0 miRTarBase,2 which is an online database containing plenty of experimentally validated microRNA–target interactions (Hsu et al., 2011), was applied to identify the potential target genes of the DE-miRNA. Species selects: Homo sapiens. miRNA ID was entered as “hsa-miR-590-3p/hsa-miR-492/hsa-miR-631” to obtain the gene list of predicted target genes. Since the list contains a small number of strong evidence genes, we selected all the genes in the gene list (including strong evidence and less strong evidence) for relevant pathway enrichment analysis.
Copyright and License information: ©2021 Duan, Qiao, Li, Li, Zheng, Wang and Zhu.
This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
Do you have any questions about this protocol?
Post your question to gather feedback from the community. We will also invite the authors of this article to respond.
Post a Question0 Q&A
