Improve Research Reproducibility A Bio-protocol resource
- Home
- Protocols
-
Concise Method
Correlation Analysis of Genome Instability With Prognosis and Tumor Immune Infiltration in LncRNA Signature
Request a Protocol
Ask a
question
Favorite
According to the median value of the risk score in the training set as the risk cutoff value, patients with a high risk score were divided into a high-risk group and those with a low risk score were divided into a low-risk group. Next, based on RNA profiles, “CIBERSORT” package was used to quantify 22 immune cells infiltration levels in colon cancer samples with cutoff P value < 0.05. Further analyses were performed to explore the relationships between prognostic risk, somatic mutation, MSI, single gene mutations and immune cell infiltration level.
Copyright and License information: ©2021 Yin, Zhao and Yao.
This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
Do you have any questions about this protocol?
Post your question to gather feedback from the community. We will also invite the authors of this article to respond.
Post a Question0 Q&A
