A DCV prediction model was constructed using the Group A CSF/PBD3 dataset. The model used the 26 miRNAs (“variables,” Supplementary File 1) that did not have any missing data across all 3 patient groups. Among the 26 miRNAs, the expression levels of 7 miRNAs exhibited perfect discrimination between DCV+ and DCV- patient groups in the Group A dataset (Supplementary Figure 2 and Supplementary File 1). These seven miRNAs each served as individual predictors in a consensus predictive tool. The remaining 19 miRNAs were used to generate a decision tree using the Recursive partitioning and regression trees (Therneau and Atkinson, 2019) (Rpart) algorithm in R.
Do you have any questions about this protocol?
Post your question to gather feedback from the community. We will also invite the authors of this article to respond.