The accession number for the RNaseq data reported in this paper is NCBI GEO: . The custom code used for image analysis and lumen segmentation is publicly available at GSE153076https://github.com/esriis/organoid-lumen-segmentation. The custom code used for segmentation and counting of TBR2+ cells is publicly available at (https://github.com/StefanoLG92/FIJI-macros).
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