Data and code availability

SB Silvia Benito-Kwiecinski
SG Stefano L. Giandomenico
MS Magdalena Sutcliffe
ER Erlend S. Riis
PF Paula Freire-Pritchett
IK Iva Kelava
SW Stephanie Wunderlich
UM Ulrich Martin
GW Gregory A. Wray
KM Kate McDole
ML Madeline A. Lancaster
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The accession number for the RNaseq data reported in this paper is NCBI GEO: GSE153076. The custom code used for image analysis and lumen segmentation is publicly available at https://github.com/esriis/organoid-lumen-segmentation. The custom code used for segmentation and counting of TBR2+ cells is publicly available at (https://github.com/StefanoLG92/FIJI-macros).

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