Synaptosome isolation and pHrodo labeling

XD Xin Ding
JW Jin Wang
MH Miaoxin Huang
ZC Zhangpeng Chen
JL Jing Liu
QZ Qipeng Zhang
CZ Chenyu Zhang
YX Yang Xiang
KZ Ke Zen
LL Liang Li
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Briefly, mice were anesthetized and forebrains were quickly removed and homogenized in ice-cold gradient buffer (320.0 mM sucrose, 5.0 mM HEPES, 0.1 mM EDTA, pH 7.5). The homogenate was centrifuged at 1000 × g for 20 min to collect supernatant, and supernatant was centrifuged at 1200 × g for 10 min to discard cell nuclei and debris and collect supernatant. The supernatant was centrifuged at 10,000 × g for 10 min to obtain pellet. The pellet was resuspended in gradient buffer and loaded onto a sucrose gradient (0.8 M: 1.2 M = 1: 1). The thin layer (the layer between 0.8 M sucrose and 1.2 M sucrose) was collected carefully after centrifugation at 100,000 × g for 1 h, and diluted with an equal volume of ultrapure water before centrifuged at 100,000 × g again to acquire the purified synaptosome pellet. The synaptosome pellet was resuspended in ice-cold artificial cerebrospinal fluid (aCSF, 2 mM CaCl2, 132 mM NaCl, 3 mM KCl, 2 mM MgSO4, 1.2 mM NaH2PO4, 10 mM HEPES, and 10 mM glucose, pH 7.4).

For pHrodo labeling, synaptosomes were incubated with pHrodo Red succinimidyl (NHS) ester (Life Technologies, P36000) or pHrodo Green STP ester (Life Technologies, P36013) in sodium carbonate buffer pH 9.0 for 2 h at 4 °C in the dark at the concentration of 1 μL pHrodo/1 mg synaptosomes. After incubation unconjugated pHrodo was washed by DPBS.

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