2.7. Western Blotting

MR Marit Rasmussen
ST Susanna Tan
VS Venkata S. Somisetty
DH David Hutin
NO Ninni Elise Olafsen
AM Anders Moen
JA Jan H. Anonsen
DG Denis M. Grant
JM Jason Matthews
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MCF-7 cells were seeded in six-well plates at a density of 2 × 105 cells per well. Forty-eight hours after serum starvation, cells were treated with test ligands for 4 or 24 h. Cells were lysed in RIPA buffer supplemented with 1X PIC and sonicated at a low intensity for 2 × 30 s on/off. The protein concentration of the clarified lysate was determined using the BCA assay according to the manufacturer’s protocol (Thermo Fisher Scientific). 40 µg of protein was separated by SDS-PAGE and transferred to polyvinylidene fluoride (PVDF) membranes. COS-1 cells were transfected with 1 µg of pEGFP-PARP7, pEGFP-PARP7 33–657, pEGFP-PARP7 53–657, pEGFP-PARP7 103–657, pEGFP-PARP7 200–657, pEGFP-PARP7 235–657, or pEGFP-PARP7 1–234. MEFs were seeded in six-well plates at a density of 1.0 × 105 cells per mL. MCF-7 PARP7-HA cells were seeded in six-well plates at a density of 1.2 × 105 cells per mL. After 24 h, these cells were incubated with and without 1.5 μg/mL DOX. The following day, cells were harvested and lysed in lysis buffer (200 mM NaCl, 20 mM Hepes, 1% Nonidet P-40), 20 µg of protein was separated by SDS-PAGE and transferred to PVDF membranes. Membranes were incubated with lab-generated anti-PARP7, anti-PARP7 (Abcam, Cambridge, UK; ab84664; lot# GR3304056-5), anti-ERα (MCF-7 cells only; Santa Cruz Biotechnology; HC-20), anti-GFP (COS-1 only; Clontech Laboratories, Mountain View, CA, USA; JL-8, anti-HA (MCF-7 PARP7-HA cells only; BioLegend, San Diego, CA, USA; 16B12) and anti-β-actin (Sigma-Aldrich; AC-74). After incubation with appropriate secondary antibody, bands were visualized with SuperSignalTM West Dura Extended Duration Substrate or SuperSignalTM West Femto Maximum Sensitivity Substrate (Thermo Fisher Scientific).

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