Bioinformatics analysis

JC José F. Català-Senent
MH Marta R. Hidalgo
MB Marina Berenguer
GP Gopanandan Parthasarathy
HM Harmeet Malhi
PM Pablo Malmierca-Merlo
MI María de la Iglesia-Vayá
FG Francisco García-García
request Request a Protocol
ask Ask a question
Favorite

The same three-step transcriptomic analysis strategy was applied to each separate study: (i) data acquisition and preprocessing, (ii) differential gene expression and functional enrichment analysis, and (iii) differential pathway activation and functional analysis. The functional results of all studies were integrated using meta-analytical techniques (Fig. (Fig.1).1). Bioinformatics analysis was carried out using the programming language R 3.6.0 [12]; information regarding the packages used and their version numbers are provided in the supplementary material.

Data analysis workflow

Do you have any questions about this protocol?

Post your question to gather feedback from the community. We will also invite the authors of this article to respond.

0/150

tip Tips for asking effective questions

+ Description

Write a detailed description. Include all information that will help others answer your question including experimental processes, conditions, and relevant images.

post Post a Question
0 Q&A