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Orthofinder (Emms and Kelly, 2015) was used for genome-wide prediction of lettuce orthologs of flowering-time-related genes characterized in A. thaliana. Amino acid sequences of seven eudicot genomes, A. thaliana, Solanum lycopersicum, Daucus carota, Helianthus annuus, Cichorium intybus, L. serriola, and L. sativa, were used in the orthology analysis. The list of flowering time genes was obtained from the interactive database of flowering-time gene networks in A. thaliana (Bouché et al., 2015)1.
Copyright and License information: ©2021 Han, Truco, Lavelle and Michelmore.
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