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Genome data analysis

MY Minako Yoshihara
TS Tetsuya Sato
DS Daisuke Saito
OO Osamu Ohara
TK Takashi Kuramoto
MS Mikita Suyama
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The Integrative Genomics Viewer (IGV; v2.2.13) [24] was used to visualize the mapped reads and variants. The UCSC Genome Browser was used for the comparative analysis of genomes and their associated annotations [19]. Spatial proximity on the chromosome was analyzed using the ChromContact web server [17], which uses high-resolution Hi-C data for human cell lines [16].

Copyright and License information: The Author(s). ©2017
Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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