DHODH enzymatic assay

ML Marcus J. G.W. Ladds
GP Gergana Popova
AP Andrés Pastor-Fernández
SK Srinivasaraghavan Kannan
IL Ingeborg M.M. van Leeuwen
MH Maria Håkansson
BW Björn Walse
FT Fredrik Tholander
RB Ravi Bhatia
CV Chandra S. Verma
DL David P. Lane
SL Sonia Laín
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Enzyme assays were performed with 6 nm recombinant human DHODH prepared as described (36). The reaction mixture for these kinetic assays consisted of 1 mm DHO, 100 μm 2,3-dimethoxy-5-methyl-p-benzoquinone (Sigma–Aldrich #D9150), and 100 μm 2,6-dichlorophenolindophenol sodium salt (DCIP; Sigma–Aldrich #D1878) in enzyme buffer (50 mm Tris-HCl pH 8.0, 0.1% Triton X-100, 150 mm KCl). A stock solution of 20 mm DCIP was prepared in enzyme buffer and filtered through filter paper (20−25-μm pore size) just before use. Loss in absorbance by DCIP was measured at 595 nm at room temperature in a stepped time course (8 × 2 min, 8 × 3 min, 6 × 5 min). The observed decrease in absorbance over time was linear between 8 and 26 min. Therefore, for each concentration of inhibitor tested, a value for DHODH's Vmax was estimated by linear regression within this time frame. The IC50 is defined as the concentration of inhibitor that gives Vmax([I]) = Vmax(DMSO)/2.

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