Soil PLFA analysis

ZZ Zhiyong Zhang
XZ Xiaoke Zhang
MM Md. Mahamood
SZ Shuiqing Zhang
SH Shaomin Huang
WL Wenju Liang
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Analysis of phospholipid fatty acids (PLFAs) was used to characterize the composition of the soil microbial community, according to the method of Bossio and Scow53. Lipids were extracted from 8 g freeze-dried soil using a mixture of chloroform: methanol: citrate buffer (1:2:0.8). Polar lipids were separated from neutral lipids and glycolipids on solid phase extraction columns (Supelco Inc., Bellefonte, PA, USA). Phospholipids were treated with a mild-alkali methanolysis and the produced fatty acid methyl esters were subsequently extracted in hexane and dried under N2. Samples were analysed using an Agilent 7890A series Gas Chromatograph equipped with MIDI peak identification software (Version 4.5; MIDI Inc., Newark, DE, USA). Before analysis, samples were dissolved in hexane that contained 19:0 as an internal standard. The following markers were chosen to represent bacterial biomass (i.e., 14:0, i14:0, 15:0, i15:0, a15:0, 16:0, i16:0, 16:1 ω7c, 16:1 ω9c, 17:0, i17:0, a17:0, 17:1 ω8c, cy 17:0, 18:0, 18:1 ω5c, 18:1 ω7c, 18:1 ω9c, and cy 19:0), and 18:2 ω6c represented fungal biomass46.

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