The fluorescence measurement data were also visualized and analyzed using freely available software, Combenefit (version 2.021, Cancer Research UK Cambridge Institute, Cambridge, UK), which simultaneously assesses synergy/antagonism from dose-response data using three classical models, namely the Loewe, the Bliss, and the Highest Single Agent (HAS). In this study, we applied the Loewe additivity theory for two-drug combinations. The analysis was performed as described by Di veroli et al. [39]. Briefly, the data were expressed as a “percentage of control” and saved in .xls files according to a template provided by the software developers. The difference between the Loewe model-based expected additive effect and the actual effect of the drug combination was calculated by the software. This difference value is called a synergy score. The software calculates a synergy score for each combination, where a positive score indicates synergy, a score of 0 is additive, and a negative score indicates antagonism [39]. The calculated values were represented as a synergy heatmap with the color scale from blue (synergism) to red (antagonism).
Do you have any questions about this protocol?
Post your question to gather feedback from the community. We will also invite the authors of this article to respond.