2.6. Western Blot

CS Christina Skofler
FK Florian Kleinegger
SK Stefanie Krassnig
AB Anna Maria Birkl-Toeglhofer
GS Georg Singer
HT Holger Till
MB Martin Benesch
RC Regina Cencic
JJ John A. Porco, Jr.
JP Jerry Pelletier
CC Christoph Castellani
AR Andrea Raicht
EI Ewa Izycka-Swieszewska
PC Piotr Czapiewski
JH Johannes Haybaeck
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Semi-dry immunoblotting was performed as described previously [24]. Briefly, 30 µg of total protein lysate was separated using SDS polyacrylamide gel electrophoresis and proteins were blotted on Immobilon-P PVDF membranes (0.45 µm; Millipore, Burlington, MA, USA). For the assessment of whether the protein transfer was successful, membranes were reversibly stained using Ponceau S (Sigma Aldrich, St. Louis, MO, USA). Primary antibodies (anti-eIF4E-antibody product# 9742; anti-eIF4AI-antibody product# 2490; anti-GAPDH-antibody product# 2118; all three Cell Signaling Technology; anti-Actin-antibody product# A2103, Sigma Aldrich) were diluted 1:1000 in Tris-buffered saline supplemented with 0.1% Tween (TBS-T) containing 5% bovine serum albumin (BSA fraction V, Roche Diagnostics) and incubated overnight at 4 °C. Subsequently, horseradish peroxidase conjugated secondary anti-rabbit antibody (1:5000 dilution in 5% non-fat dried milk in TBS-T; ECL™ Anti-rabbit IgG HRP; GE Healthcare, Chicago, IL, USA) was incubated for 1 h at room temperature. For puromycin detection, anti-puromycin antibody (clone 12D10, product# MABE343; MERCK KGaA, Darmstadt, Germany) was diluted 1:5000 in TBS-T containing 5% bovine serum albumin and incubated overnight at 4 °C. Subsequently, horseradish peroxidase-conjugated secondary anti-mouse antibody (1:3000 dilution in 5% non-fat dried milk in TBS-T; ECL™ Anti-mouse IgG HRP; GE Healthcare) was incubated for 1 h at room temperature.

The visualization of proteins of interest via chemiluminescence using Amersham ECL Select Western blotting detection Reagent (GE Healthcare) was performed using the ImageQuantTM LAS 500 (GE Healthcare). The ImageJ software [25] was used for densitometrical analysis and the signals were normalized to GAPDH and Actin as a loading control.

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