Luciferase reporter assays were conducted as previously described.23 In short, psiCheck-2 plasmids (Promega, USA) were cotransfected with different amounts of duplex RNAs (up to 75 nM) using Lipofectamine 2000 or 3000 (Invitrogen, USA). Twenty-four hours after transfection, relative activity (Renilla luciferase activity normalized to firefly luciferase) was measured using a Dual-Luciferase reporter assay system (Promega, USA) with the GloMax-multi detection system (Promega, USA) with six replicates, following the manufacturer’s protocol. IC50 was calculated by performing nonlinear least-squares fitting for the sigmoid function using Scipy (scipy.optimize.curve_fit()). In cases where least-squares fitting failed to fit the function, an approximate IC50 was estimated from the regression line.
Do you have any questions about this protocol?
Post your question to gather feedback from the community. We will also invite the authors of this article to respond.