Plasmid and vectors

ES Ekaterina V. Sheshukova
TK Tatiana V. Komarova
DP Denis V. Pozdyshev
NE Natalia M. Ershova
AS Anastasia V. Shindyapina
VT Vadim N. Tashlitsky
ES Eugene V. Sheval
YD Yuri L. Dorokhov
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To obtain the plasmid encoding NbAELP fused to the DYKDDDDKDYKDVDDYKDDDDK (3xFLAG) sequence (Ueda et al., 2011), a 3'-fragment of NbAELP containing the 3xFLAG encoding sequence was amplified using NbAELP(BglII+) and FL_SalI_r primers and subsequently digested with BglII and SalI. The 3xFLAG encoding sequence was generated after annealing the primers FL2_SalI_r and FL2_SalI_d, resulting in a fragment with overhangs corresponding to SalI and PstI “sticky” ends. These fragments were inserted into 35S-NbAELP via BglII/PstI sites to generate the 35S-NbAELP:3xFLAG plasmid. To obtain the proNbAELP (1000):GUS plasmid, NheI and SacI sites were introduced at the 5′- and the 3′-ends of proNbAELP, respectively, through PCR with primers “proNbAELP (NheI+)” and “proNbAELP (SacI−).” The proNbAELP (1,000) NheI/SacI fragment and the GUS-35S(term) fragment flanked with SacI/EcoRI sites was cloned into pBIN19, previously digested with XbaI/EcoRI, to generate the proNbAELP(1000):GUS construct. To obtain the proNbAELP(1500):GUS variant, the upstream region of proNbAELP was amplified using the primers “proNbAELP(SbfI+)” and “proNbAELP (HindIII−)” and subsequently inserted with the proNbAELP(1000):GUS fragment, flanked with HindIII/EcoRI sites, into pBIN19, previously digested with SbfI/EcoRI. To obtain proNbAELP(500):GUS, the 3′-proximal ~500 nt fragment of proNbAELP, digested with SalI/SacI, and the GUS-35S(term) fragment, flanked with SacI/EcoRI, were inserted into pBIN19 via SalI/EcoRI sites.

The proNtPME sequence was amplified using the primer pairs “PMEpr (HindIII+)” and “PMEpr (NcoI−)” and subsequently cloned into the pAL-TA vector (Evrogen, Russia). The obtained proNtPME fragment, with flanking 5′-HindIII and 3′-NcoI sites and the fragment containing GUS-35S(term), digested with NcoI/EcoRI, was inserted into pCampia1300 (CAMBIA, Australia) via HindIII/EcoRI sites, resulting in the proNtPME:GUS construct. For proNtPME:GFP construct, the second used fragment was GFP-35S(term) flanked with NcoI/EcoRI sites.

A full list of the oligonucleotides used for cloning is presented in Table S1.

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