Data sources for comparative genomics (gene family analysis)

ID I. M. De-la-Cruz
AH A. Hallab
UO U. Olivares-Pinto
RT R. Tapia-López
SV S. Velázquez-Márquez
DP D. Piñero
KO K. Oyama
BU B. Usadel
JN J. Núñez-Farfán
request Request a Protocol
ask Ask a question
Favorite

Gene family analyses included 11 genomes representing almost all the Solanaceae species that have complete genomes as well as the two genomes of D. stramonium. Retrieval of protein coding genes and CDS from 11 genomes were sourced from the Sol Genomics Network (https://solgenomics.net/; Nicotiana tabacum15, Nicotiana sylvestris11, Nicotiana attenuata26, Nicotiana tomentosiformis11, Solanum pimpinellifolium16, Solanum lycopersicum10, Solanum pennellii13, Solanum tuberosum9, Capsicum annuum, CM334 v1.5599, Capsicum annuum var. glabriusculum12 and Petunia inflata14.

Do you have any questions about this protocol?

Post your question to gather feedback from the community. We will also invite the authors of this article to respond.

0/150

tip Tips for asking effective questions

+ Description

Write a detailed description. Include all information that will help others answer your question including experimental processes, conditions, and relevant images.

post Post a Question
0 Q&A