Tissue lysate preparation and Western blot analysis

TK Tae-In Kam
XM Xiaobo Mao
HP Hyejin Park
SC Shih-Ching Chou
SK Senthilkumar S. Karuppagounder
GU George Essien Umanah
SY Seung Pil Yun
SB Saurav Brahmachari
NP Nikhil Panicker
RC Rong Chen
SA Shaida A. Andrabi
CQ Chen Qi
GP Guy G. Poirier
OP Olga Pletnikova
JT Juan C. Troncoso
LB Lynn M. Bekris
JL James B. Leverenz
AP Alexander Pantelyat
HK Han Seok Ko
LR Liana S. Rosenthal
TD Ted M. Dawson
VD Valina L. Dawson
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Human post mortem brain (Table S3) or mouse brain tissue were homogenized and prepared in lysis buffer [50 mM Tris-HCl (pH 7.4), 150 mM NaCl, 1 mM EDTA, 1% Triton x-100, 0.5% SDS, 0.5% sodium-deoxycholate, phosphatase inhibitor mixture I and II (Sigma-Aldrich, St. Louis, MO), and complete protease inhibitor mixture (Roche, Indianapolis, IN)], using a Diax 900 homogenizer (Sigma-Aldrich). After homogenization, samples were rotated at 4°C for 30 min for complete lysis, the homogenate was centrifuged at 15,000 x g for 20 min and the supernatants were used for further analysis. Protein levels were quantified using the BCA assay (Pierce, Rockford, IL), samples were separated using SDS-polyacrylamide gels and transferred onto nitrocellulose membranes. The membranes were blocked with 5% non-fat milk in TBS-T (Tris-buffered saline with 0.1% Tween-20) for 1 h, probed using primary antibodies (Table S4) and incubated with appropriate HRP-conjugated secondary antibodies (Cell signaling, Danvers, MA). The bands were visualized by ECL substrate.

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