Methylated RNA Immunoprecipitation (MeRIP) Assay

XL Xiangxiang Liu
JQ Jian Qin
TG Tianyi Gao
CL Chenmeng Li
BH Bangshun He
BP Bei Pan
XX Xueni Xu
XC Xiaoxiang Chen
KZ Kaixuan Zeng
MX Mu Xu
CZ Chengbin Zhu
YP Yuqin Pan
HS Huiling Sun
LS Li Sun
TX Tao Xu
SW Shukui Wang
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The MeRIP assay was conducted by using the Magna MeRIP m6A Kit (17–10,499, Millipore, USA) according to the manufacturer’s instructions. Briefly, 5 μg isolated mRNA was chemically fragmented into 100 nucleotides or less and immunoprecipitated with 5 μg m6A antibody or anti-mouse IgG linked to Magna IP Protein A/G Magnetic Beads. One tenth volume of fragmented RNA was saved as “10% input.” After elution with 6.7 mM N6-methyladenosine 5′-monophosphate sodium salt, the expression of m6A-modified genes was determined by qRT-PCR with specific primers whose sequences are shown in Table S3. Then, qRT-PCR products were further analyzed via agarose gel electrophoresis (AGE).

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