Establishment of Pin1 KO cell lines using CRISPR/Cas9

BP Benika J. Pinch
ZD Zainab M. Doctor
BN Behnam Nabet
CB Christopher M. Browne
HS Hyuk-Soo Seo
MM Mikaela L. Mohardt
SK Shingo Kozono
XL Xiaolan Lian
TM Theresa D. Manz
YC Yujin Chun
SK Shin Kibe
DZ Daniel Zaidman
DD Dina Daitchman
ZY Zoe C. Yeoh
NV Nicholas E. Vangos
EG Ezekiel A. Geffken
LT Li Tan
SF Scott B. Ficarro
NL Nir London
JM Jarrod A. Marto
SB Stephen Buratowski
SD Sirano Dhe-Paganon
XZ Xiao Zhen Zhou
KL Kun Ping Lu
NG Nathanael S. Gray
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Pin1-targeting guides were annealed into the BbsI restriction site of the pX458 plasmid (Addgene cat#48138). The gRNA sequence used was: CAGTGGTGGCAAAAACGGGC. Cells were transfected using the Neon Transfection System (Life Technologies) according to manufacturer guidelines, and GFP+ cells were sorted using fluorescence-activated cell sorting (FACS) using a J AriaII SORP UV machine (BD). Single cell clones were isolated from the bulk-sorted population using limiting dilution plating in a 96-well plate. Once clones were isolated, they were verified for Pin1 knockout by western blotting and by genomic DNA PCR using the following primers: forward: GAGCCTGTGGCACATGGTG, reverse: CAGGGTCAGGTCATGCACTG, sequencing: CTGGCTTCTGGCTGTG, and sequences were analyzed using Tracking of Indels by Decomposition (TIDE)50.

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