Abbreviations

SA Sam Ansari
KB Karine Baumer
SB Stéphanie Boué
SD Sophie Dijon
RD Remi Dulize
KE Kim Ekroos
AE Ashraf Elamin
CF Clement Foong
EG Emmanuel Guedj
JH Julia Hoeng
NI Nikolai V. Ivanov
SK Subash Krishnan
PL Patrice Leroy
FM Florian Martin
CM Celine Merg
MP Michael J. Peck
MP Manuel C. Peitsch
BP Blaine Phillips
WS Walter K. Schlage
TS Thomas Schneider
MT Marja Talikka
BT Bjoern Titz
PV Patrick Vanscheeuwijck
EV Emilija Veljkovic
TV Terhi Vihervaara
GV Gregory Vuillaume
CW Ching Qing Woon
request Request a Protocol
ask Ask a question
Favorite

Lipids were annotated according to the described shorthand notation32 and LIPID MAPS nomenclature33. Briefly, the different lipid species of PC, phosphatidylethanolamine (PE), phosphatidylserine (PS), phosphatidylinositol (PI), phosphatidic acid (PA), phosphatidylglycerol (PG), and diacylglycerol (DAG) are listed with the two fatty acyl groups separated with a hyphen, e.g., PC 16:0–18:1, when positions are unknown and with a slash, e.g., PC 16:0/16:0, when known. LysoPC and lysoPE are abbreviated as LPC and LPE, respectively, and cholesteryl esters are abbreviated CE. Ether-linked phospholipids are shown as PC O (alkyl), PC P (alkenyl), PE O (alkyl), and PE P (alkenyl). Fatty acyl groups of ether-linked lipids and N-amidated fatty acyl groups for SM, ceramide (Cer), sphingolipids, and gangliosides are shown after the slash. Sphingolipids are: sphingosine (SPH), sphingosine-1-phosphate (S1P), sphinganine-1-phosphate (SA1P), glucosylceramide (GlcCer), lactosylceramide (LacCer), and globotriaosylceramide (Gb3). Gangliosides are: GD1, GM1, GM3, GQ1 and GT2. Fatty acids and eicosanoids are: docosahexaenoic acid (DHA), arachidonic acid (AA), eicosapentaenoic acid (EPA), 12-hydroxyeicosatetraenoic acid (12-HETE), 11-hydroxyeicosatetraenoic acid (11-HETE), 15-hydroxyeicosatetraenoic acid (15-HETE), 8-hydroxyeicosatetraenoic acid (8-HETE), 5-hydroxyeicosatetraenoic acid (5-HETE), prostaglandin E2 (PGE2), prostaglandin D2 (PGD2), 13-hydroxyoctadecadienoic acid (13-HODE), 9- hydroxyoctadecadienoic acid (9-HODE), 6-keto prostaglandin F1α (6-keto-PGF1alpha), prostaglandin F2α (PGF2alpha), tromboxane B2 (TXB2), tromboxane B3 (TXB3), 12-hydroxyeicosapentaenoic acid (12-HEPE), 14,15-dihydroxyeicosatrienoic acid (14_15-DHET), 11,12-dihydroxyeicosatrienoic acid (11_12-DHET), 8,9-dihydroxyeicosatrienoic acid (8_9-DHET), 5,6-dihydroxyeicosatrienoic acid (5_6-DHET), hydroxyoctadecatrienoic acid (13-HOTrE), 12-oxo-eicosatetraenoic acid (12-oxoETE), 5-oxo-eicosatetraenoic acid (5-oxoETE), 5-hydroxyicosapentaenoic acid (5-HEPE), 15-hydroxyicosapentaenoic acid (15-HEPE).

Data resulting from lipidomics analyses have been submitted to MetaboLights [Data Citation 3].

Do you have any questions about this protocol?

Post your question to gather feedback from the community. We will also invite the authors of this article to respond.

0/150

tip Tips for asking effective questions

+ Description

Write a detailed description. Include all information that will help others answer your question including experimental processes, conditions, and relevant images.

post Post a Question
0 Q&A