Gene Expression Profiling Interactive Analysis (GEPIA), Kaplan-Meier (KM) Plotter, and TISIDB Databases

LK Lingming Kong
PL Peng Liu
XF Xiang Fei
TW Tianyu Wu
ZW Zhongpeng Wang
BZ Baohui Zhang
JL Jiatong Li
XT Xiaodong Tan
request Request a Protocol
ask Ask a question
Favorite

The Gene expression profiling interactive analysis (GEPIA) website provided the differentially expressed genes between 179 pancreatic tumor samples and 171 normal samples based on the integrated RNA-Seq data from TCGA and Genotype-Tissue Expression (GTEx) databases (34). The KM plotter website provided the genes associated with overall survival and relapse-free survival of patients from TCGA dataset (35). The TISIDB website was used to analyze the relationship between clinicopathological information and gene expression (36).

Do you have any questions about this protocol?

Post your question to gather feedback from the community. We will also invite the authors of this article to respond.

post Post a Question
0 Q&A