UALCAN Analysis

QH Qin Huo
ZL Zhenwei Li
LC Lixin Cheng
FY Fan Yang
NX Ni Xie
request Request a Protocol
ask Ask a question
Favorite

UALCAN (http://ualcan.path.uab.edu/) is an effective online analysis and mining website for an in-depth analysis of gene expression data using TCGA levels 3 RNA-seq and clinical data from 31 cancer types (28). It allows the relative expression of genes between tumors and normal samples, as well as in different tumor subgroups based on sample type, individual tumor stage, major subclasses, and other clinical pathological features. We entered the target gene SIRT7 on the home page of the website, selected breast invasive carcinoma, and obtained differential expression of the target gene in breast cancer tissues and normal tissues. This study will analyze the differential expression of SIRT7 from various angles such as sample type (normal/primary tumor), breast cancer subclass (luminal, HER2+, and triple-negative), cancer stage (stages 1, 2, 3, and 4), and menopause status (premenopause, perimenopause, and postmenopause).

Do you have any questions about this protocol?

Post your question to gather feedback from the community. We will also invite the authors of this article to respond.

0/150

tip Tips for asking effective questions

+ Description

Write a detailed description. Include all information that will help others answer your question including experimental processes, conditions, and relevant images.

post Post a Question
0 Q&A