Mitochondrial ROS analysis was performed using the dye MitoSOX (M36008, Invitrogen). Mitochondrial content was assayed using the dye MitoTracker FM (M22425, Invitrogen), which passively diffuses across the plasma membrane and accumulates in active mitochondria.
20x104 fibroblasts per condition were grown for two days, reaching 70% confluence in p100 plates. Cells were detached using trypsin for 5 min at 37 °C. For MitoSOX staining, cells were washed once using warm HBSS, incubated with 5 μM of MitoSOX in HBSS for 30 min at 37 °C, washed 3x using warm HBSS and suspended in HBSS. For MitoTracker staining, cells were washed with PBS, incubated with 0.2 μM MitoTracker for 30 min at 37 °C, washed 3x using warm PBS and suspended in PBS. Cells were directly analyzed via flow cytometry. In FSC and SSC, we first gated the population; next, two gates were set on SSC-A vs. SSC-H and SSC-A vs. SSC-W to exclude doublets. Based on an unstained control, MitoSOX+ and MitoTracker+ gates were set. Mean fluorescence of MitoSOX+ was normalized as a mean fluorescence of MitoTracker values, which represents ROS production per mitochondria. Antimycin was used as a positive control and FCCP as a negative control.
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