shRNA constructions for lentivirus package.

RS Rui Su
MS Muhammad Adnan Shereen
XZ Xiaofeng Zeng
YL Yicong Liang
WL Wen Li
ZR Zhihui Ruan
YL Yongkui Li
WL Weiyong Liu
YL Yingle Liu
KW Kailang Wu
ZL Zhen Luo
JW Jianguo Wu
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The target sequences of shRNAs for human TLR3 and IRF1 genes and the sequence of the negative-control shRNA were as follows: shTLR3-1#, 5′-GCTTGGATGTAGGATTTAACA-3′; shTLR3-2#, 5′-GGTAACGATTCCTTTGCTTGG-3′; shTLR3-3#, 5′-GGAGCACCTTAACATGGAAGA-3′; shIRF1-1#, 5′-GCCAGATATCGAGGAGGTGAA-3′; shIRF1-2#, 5′-GGGATATTGGGCTGAGTCTAC-3′; shIRF1-3#, 5′-GCGTGTCTTCACAGATCTGAA-3′; shNC, 5′-CAACAAGATGAAGAGCACCAA-3′.

HEK293T cells were transfected with the pLKO.1 vector encoding the negative-control or gene-targeting shRNAs, psPAX2, and pMD2.G at the ratio of 4:3:1 using Lipofectamine 2000. Forty-eight hours later, the lentivirus from supernatants was collected to infect FHC or HT29 cells. After an additional 48 h of culture, cells were selected by 1.5 μg/ml puromycin (Sigma-Aldrich, St. Louis, MO, USA). The efficiency of shRNAs to knock down the target genes was evaluated by immunoblot analysis.

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