For western blotting tissues were homogenized in radioimmunoprecipitation assay buffer (RIPA) supplemented with protease and phosphatase inhibitor cocktails (aprotinin, leupeptin, benzamidin, pepstatin A, PMSF, sodium fluoride, sodium orthovanadate and β-glycerophosphate), with an Ultra-Turrax® homogenizer. Samples were centrifuged at 15,000 x g for 15 min at 4°C. Supernatantprotein was quantified and protein extracts were mixed with a loading buffer 4X (40% glycerol, 2% SDS, 250 mM Tris pH 6.8, 0.02% bromophenol blue, and 12% β-mercaptoethanol). Western blots were performed with 20 μg of tissue extracts. Proteins were separated in 8–12% SDS-PAGE and transferred to a nitrocellulose membrane (BioRad). The membrane was blocked in 5% milk, incubated with primary antibody in TBST with 5% BSA overnight at 4°C, and then incubated with Horseradish peroxidase activity linked to secondary antibody. Protein signal was detected with ECL substrate (Pierce) using X-Ray films. Primary antibodies used were c-MYC (1472–1, Epitomics), PSAT1 (20180–1-AP, Protein Tech), PHGDH (sc292792, Santa Cruz), β-Actin (A2228 and A3854, Sigma), Cleaved CASP3 (9661, Asp175, Cell Signaling), Glucokinase (AP7901C, Abgent), GLS2 (6217, ProSci), FASN (#23180, C20G5, Cell Signaling), HK1 (#2024, C35C4, Cell Signaling), HK2 (#2867, C64G5, Cell Signaling), PCNA (#13110, D3H8P, Cell Signaling), PARP (#9542, Cell Signaling), with the GLS1-KGA specific antibody was a generous gift from Astra Zeneca.
For immunofluorescence, tissues were fixed for 24 hours in 4% paraformaldehyde, equilibrated in 30% sucrose, embedded in OCT compound (VWR international), and stored at −80°C until 7-μm-thick cryosections were obtained. Sections were permeabilized by incubating with 0.2% Triton X-100 in PBS for 10 min, and treated with the indicated primary antibody for 16 h. Primary antibodies used were: GFP (4745–1051, Bio-Rad) and PanCK (Z0622, Dako). After four washes with 0.05% Tween in PBS, cells were incubated with anti-rabbit Alexa Fluor® 488 or 555 secondary antibodies (Invitrogen) for 1 hour. Nuclear marker DAPI was included in the mounting media. Samples were examined using a confocal microscope (TCS SP5 II Leica) and LCS Lite software (Leica) was used to collect digital images.
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