Quality control of sequence data

BS Bastian Seelbinder
JC Jiarui Chen
SB Sascha Brunke
RV Ruben Vazquez-Uribe
RS Rakesh Santhaman
AM Anne-Christin Meyer
FL Felipe Senne de Oliveira Lino
KC Ka-Fai Chan
DL Daniel Loos
LI Lejla Imamovic
CT Chi-Ching Tsang
RL Rex Pui-kin Lam
SS Siddharth Sridhar
KK Kang Kang
BH Bernhard Hube
PW Patrick Chiu-yat Woo
MS Morten Otto Alexander Sommer
GP Gianni Panagiotou
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Quality control of raw reads (DNA, RNA) used a previously described pipeline [61]. Adapter sequences, low-quality bases (Q < 20), duplicated reads, reads shorter than 75 bp and reads mapping to the human genome with 95% coverage were filtered out. Computational scripts are at https://github.com/TingtZHENG/VirMiner/.

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