The concentration of the xanthophyll cycle pigments was determined by HPLC pigment analysis. The pigments were extracted from thylakoid membranes by 80% acetone and analysed using an Agilent 1,200 HPLC–DAD system (Agilent, USA) equipped with a LiChroCART RP-18 (250 × 4 mm, 5 μm) chromatographic column (Merck, Germany) applying the eluent system and gradient programme described by72. Dark-adapted thylakoid membranes of appropriate pH were taken after 10 min of the dark period (control samples), and illuminated thylakoids, after 10 min of illumination (770 µmol photons m−2 s−1; after measurement of light-induced NPQ). The extent of Vx de-epoxidation was determined as de-epoxidation state of xanthophyll cycle pigments DEPS = (Zx + Ax)/(Vx + Ax + Zx) according to73.
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