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The presence of plasmid was analyzed using Plasmid finder 1.3 available from CGE server (https://cge.cbs.dtu.dk/services/). The incompatibility (Inc) type of the plasmid was analyzed using pMLST (https://pubmlst.org/plasmid/). The carbapenemase harbouring plasmid from the WGS of the isolate P5558 was assembled using plasmidSPAdes [24]. The plasmid was assembled further against a reference plasmid [12] using Bowtie2 [25] and plotted using CGview server [26].
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