Real time-quantitative PCR (RT-qPCR)

PL Peng Li
SD Sarah Diab
MY Mingfeng Yu
JA Julian Adams
SI Saiful Islam
SB Sunita K.C. Basnet
HA Hugo Albrecht
RM Robert Milne
SW Shudong Wang
request Request a Protocol
ask Ask a question
Favorite

RNA was extracted from the cells using a High Pure RNA Isolation Kit (Roche Applied Science, Castle Hill, NSW, Australia) and 1 μg of RNA was used in a 20 μL reverse transcription reaction (Transcriptor First Strand cDNA Synthesis Kit, Roche Applied Science, Castle Hill, NSW, Australia). RT-qPCR was performed in duplicate using SYBR Green I dye (Roche Applied Science, Castle Hill, NSW, Australia) with the LightCycler LC96 (Roche Applied Science, Penzberg, Germany). All primers were purchased from Sigma-Aldrich (Castle Hill, NSW, Australia). Relative quantification using E-method established by Roche Applied Science was performed with β-actin mRNA as reference sequence and untreated samples as study calibrator. The cDNA samples were amplified using the following primer pairs with amplification efficiency (E): β-actin: 5′-ACTCTTCCAGCCTTCCTTC-3′(forward) and 5′-GATGTCCACGTCACACTTC-3′(reverse), E = 1.70; Mnk1: 5′-AAGGCCATTGAGACACTTCG-3′(forward) and 5′-CCCAAATGAAATAAAGCTCCTG-3′(reverse), E = 1.74; Mnk2: 5′-TCCTGCAGAGGTGGGACAGT-3′(forward) and 5′-ACGGTTCTGACCAGTCCTCC-3′ (reverse), E = 1.75.

Do you have any questions about this protocol?

Post your question to gather feedback from the community. We will also invite the authors of this article to respond.

0/150

tip Tips for asking effective questions

+ Description

Write a detailed description. Include all information that will help others answer your question including experimental processes, conditions, and relevant images.

post Post a Question
0 Q&A