Improve Research Reproducibility A Bio-protocol resource
- Home
- Protocols
-
Concise Method
Gene ontology (GO) and pathway enrichment analysis
Request a Protocol
Ask a
question
Favorite
The gene sets enriched in specific subtypes were further applied to ClueGO tool in Cytoscape to visualize significant gene ontology hierarchy and functional interaction maps between DEGs [17, 18].
The DEGs were classified into three GO categories, including molecular function (MF), biological process (BP) and cellular component (CC). P < 0.05 was set as the threshold value.
Copyright and License information: The Author(s). ©2018
Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
Do you have any questions about this protocol?
Post your question to gather feedback from the community. We will also invite the authors of this article to respond.
Post a Question0 Q&A
