Quantitative Reverse Transcription-PCR (qRT-PCR)

ES Elena G. Salina
AG Artem Grigorov
YS Yulia Skvortsova
KM Konstantin Majorov
OB Oksana Bychenko
AO Albina Ostrik
NL Nadezhda Logunova
DI Dmitriy Ignatov
AK Arseny Kaprelyants
AA Alexander Apt
TA Tatyana Azhikina
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One microgram of total RNA was used for cDNA synthesis with random hexanucleotides and SuperScript III reverse transcriptase (Life Technologies, USA). Quantitative PCR was performed using qPCRmix-HS SYBR (Evrogen, Russia) and the Light Cycler 480 real-time PCR system (Roche, Switzerland); cycling conditions were as follows: 95°C for 20 s, 61°C for 20 s, 72°C for 30 s, repeat 40 times; primers are listed in Supplementary Table 1. In the end of amplification, a dissociation curve was plotted to confirm specificity of the product. All real-time experiments were repeated in triplicate. The results were normalized against the 16S rRNA gene. Calculations were performed according to (Ganger et al., 2017) for the relative expression ratio.

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