Western blot analysis

SH Salman B. Hosain
SK Sachin K. Khiste
MU Mohammad B. Uddin
VV Vindya Vorubindi
CI Catherine Ingram
SZ Sifang Zhang
RH Ronald A. Hill
XG Xin Gu
YL Yong-Yu Liu
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Western blotting was carried out as described previously [33, 54]. Briefly, cells or tissue homogenates were lysed in NP40 cell lysis buffer (Biosource, Camarillo, CA, USA) to extract total cellular proteins once the treatment was finished. Protein was measured by using a bicinchoninic acid (BCA) protein assay kit (Pierce, Rockford, IL, USA). Equal amounts of proteins (50 μg/lane) were resolved by using 4-20% gradient SDS-PAGE (Life Technology). After transferring, blots of nitrocellulose membrane were blocked in 5% fat-free milk in 0.05% Tween-20, 20 mM phosphate-buffered saline, pH 7.4 (PBST), and then incubated with each one of the primary antibodies (1:500 or 1:2000 dilution), at 4°C overnight. After PBS washing, these blots were incubated with corresponding horseradish peroxidase–conjugated secondary antibodies (1:5000 dilutions) and developed using SuperSignal West Femto substrate (Thermo Fisher Scientific). Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) was used as a loading control for cellular protein. Relative protein levels present were calculated from the OD values, normalized against those for GAPDH. Antibodies against human p53 phosphorylated at Ser15, and against c-Myc, Klf4, Zeb1, and Oct4, were purchased from Cell Signaling Technology (Danvers, MA). Antibody for glucosylceramide synthase (GCS) was purchased from GeneScript (Piscataway, NJ). Antibodies for Puma, p21Waf1/Cip1, Bax, p53, E-cadherin, vimentin, TGF-β, β-catenin, and GAPDH were obtained from Santa Cruz Biotechnology (Dallas, TX).

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